sfalcon@gopher6:~/proj/SGDI/Software/Rpacks> R CMD build ontoElicitor
* checking for file 'ontoElicitor/DESCRIPTION' ... OK
* preparing 'ontoElicitor':
* checking DESCRIPTION meta-information ... OK
* installing the package to re-build vignettes
* Installing *source* package 'ontoElicitor' ...
** R
** data
** inst
** help
>>> Building/Updating help pages for package 'ontoElicitor'
Formats: text html latex example
breastOnto text html latex example
missing link(s): buildOntoHTML
** building package indices ...
* DONE (ontoElicitor)
* creating vignettes ... ERROR
Welcome to Bioconductor
Vignettes contain introductory material. To view, type
'openVignette()' or start with 'help(Biobase)'. For details
on reading vignettes, see the openVignette help page.
Error: chunk 1 (label=buildOnto)
Error in buildOntoHTML(breastOnto, "SGDI Breast Cancer", tDir) :
subscript out of bounds
Error in buildVignettes(dir = ".") : Error: chunk 1 (label=buildOnto)
Error in buildOntoHTML(breastOnto, "SGDI Breast Cancer", tDir) :
subscript out of bounds
Execution halted |